From: Aleš Křenek <ljocha@ics.muni.cz>
Date: Fri, 25 Aug 2006 12:46:06 +0000 (+0000)
Subject: sandboxy
X-Git-Tag: glite-jp_R_1_3_2~16
X-Git-Url: http://scientific.zcu.cz/git/?a=commitdiff_plain;h=7444e624437d16ea9e29fa6072ea8fdb6ef492e7;p=jra1mw.git

sandboxy
---

diff --git a/org.glite.jp/examples/pch06/pch06.jdl-template b/org.glite.jp/examples/pch06/pch06.jdl-template
index 87b4e25..8b77aeb 100644
--- a/org.glite.jp/examples/pch06/pch06.jdl-template
+++ b/org.glite.jp/examples/pch06/pch06.jdl-template
@@ -5,131 +5,85 @@ type = "dag";
 Requirements = other.GlueCEInfoHostname=="skurut17.cesnet.cz";
 LBAddress = "skurut1.cesnet.cz:9000";
 
+InputSandbox = {
+	"SANDBOX/align.sh",
+	"SANDBOX/reslice.sh",
+	"SANDBOX/softmean.sh",
+	"SANDBOX/slicer.sh",
+	"SANDBOX/convert.sh",
+	"SANDBOX/align_warp",
+	"SANDBOX/scanheader",
+	"SANDBOX/reslice",
+	"SANDBOX/softmean",
+	"SANDBOX/slicer",
+	"SANDBOX/convert",
+};
+
 nodes = [
 	align1 = [ description = [
 		executable = "align.sh";
 		arguments = "BASE1 REFERENCE";
-		inputsandbox = { "align.sh", "align_warp", "scanheader" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	align2 = [ description = [
 		executable = "align.sh";
 		arguments = "BASE2 REFERENCE";
-		inputsandbox = { "align.sh", "align_warp" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	align3 = [ description = [
 		executable = "align.sh";
 		arguments = "BASE3 REFERENCE";
-		inputsandbox = { "align.sh", "align_warp" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	align4 = [ description = [
 		executable = "align.sh";
 		arguments = "BASE4 REFERENCE";
-		inputsandbox = { "align.sh", "align_warp" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 
 
 	reslice1 = [ description = [
 		executable = "reslice.sh";
 		arguments = "BASE1"; 
-		inputsandbox = { "reslice.sh", "reslice" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	reslice2 = [ description = [
 		executable = "reslice.sh";
 		arguments = "BASE2"; 
-		inputsandbox = { "reslice.sh", "reslice" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	reslice3 = [ description = [
 		executable = "reslice.sh";
 		arguments = "BASE3"; 
-		inputsandbox = { "reslice.sh", "reslice" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	reslice4 = [ description = [
 		executable = "reslice.sh";
 		arguments = "BASE4"; 
-		inputsandbox = { "reslice.sh", "reslice" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 
 	softmean = [ description = [
 		executable = "softmean.sh";
 		arguments = "BASE1 BASE2 BASE3 BASE4 ATLAS";
-		inputsandbox = { "softmean.sh", "softmean" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 
 	slicerx = [ description = [
 		executable = "slicer.sh";
 		arguments = "ATLAS x";
-		inputsandbox = { "slicer.sh", "slicer" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	slicery = [ description = [
 		executable = "slicer.sh";
 		arguments = "ATLAS y";
-		inputsandbox = { "slicer.sh", "slicer" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	slicerz = [ description = [
 		executable = "slicer.sh";
 		arguments = "ATLAS z";
-		inputsandbox = { "slicer.sh", "slicer" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 
 	convertx = [ description = [
 		executable = "convert.sh"; 
 		arguments = "ATLAS x";
-		inputsandbox = { "convert.sh", "convert", "delegates.xml" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	converty = [ description = [
 		executable = "convert.sh"; 
 		arguments = "ATLAS y";
-		inputsandbox = { "convert.sh", "convert", "delegates.xml" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 	convertz = [ description = [
 		executable = "convert.sh"; 
 		arguments = "ATLAS z";
-		inputsandbox = { "convert.sh", "convert", "delegates.xml" };
-		stdoutput = "std.out";
-		stderror = "std.err";
-		outputsandbox = { "std.out", "std.err" };
 	] ];
 
 ];
diff --git a/org.glite.jp/examples/pch06/pch06.runme b/org.glite.jp/examples/pch06/pch06.runme
index 0ee9812..9f93278 100644
--- a/org.glite.jp/examples/pch06/pch06.runme
+++ b/org.glite.jp/examples/pch06/pch06.runme
@@ -1,12 +1,14 @@
 #!/bin/sh
 
+sandbox='gsiftp://umbar.ics.muni.cz:1414/home/ljocha/tmp/pch06'
+
 if [ -z "$6" ]; then
 	echo usage: $0 reference base1 base2 base3 base4 atlas
 	echo "	all args are URLs without suffix"
 	exit 1
 fi
 
-sed "s|REFERENCE|$1|; s|BASE1|$2|; s|BASE2|$3|; s|BASE3|$4|; s|BASE4|$5|; s|ATLAS|$6|" pch06.jdl-template >pch06.jdl
+sed "s|REFERENCE|$1|; s|BASE1|$2|; s|BASE2|$3|; s|BASE3|$4|; s|BASE4|$5|; s|ATLAS|$6|; s|SANDBOX|$sandbox|" pch06.jdl-template >pch06.jdl
 
 # glite-wms-job-submit -a pch06.jdl