|| echo $GLITE_WMS_SEQUENCE_CODE`
}
+init_log_event()
+{
+ lb_logevent=${GLITE_WMS_LOCATION}/bin/glite-lb-logevent
+ if [ ! -x "$lb_logevent" ]; then
+ lb_logevent="${EDG_WL_LOCATION}/bin/edg-wl-logev"
+ fi
+ host=`hostname -f`
+}
+
exec 2>$$.err >&2
set -x
chmod +x align_warp scanheader
-lb_logevent=${GLITE_WMS_LOCATION}/bin/glite-lb-logevent
-if [ ! -x "$lb_logevent" ]; then
- lb_logevent="${EDG_WL_LOCATION}/bin/edg-wl-logev"
-fi
-host=`hostname -f`
-
-log_event "IPAW_PROGRAM" "align_warp"
-
globus-url-copy $1.img file://$PWD/anatomy.img
globus-url-copy $1.hdr file://$PWD/anatomy.hdr
globus-url-copy $2.img file://$PWD/reference.img
globus-url-copy file://$PWD/warp $1.warp
globus-url-copy file://$PWD/$$.err $1.align-err
+
+# Log LB user_tags
+init_log_event
+log_event "IPAW_STAGE" "1"
+log_event "IPAW_PROGRAM" "align_warp"
+log_event "IPAW_INPUT" "$1.img"
+log_event "IPAW_INPUT" "$1.hdr"
+log_event "IPAW_INPUT" "$2.img"
+log_event "IPAW_INPUT" "$2.hdr"
+log_event "IPAW_OUTPUT" "$1.warp"
+log_event "IPAW_PARAM" "-m 12"
+log_event "IPAW_PARAM" "-q"
+log_event "IPAW_HEADER" "$GLOBAL_MAXIMUM"
+
#!/bin/sh
+log_event() #1 - attr.name #2 attr.value
+{
+ GLITE_WMS_SEQUENCE_CODE=`$lb_logevent\
+ --jobid="$GLITE_WMS_JOBID"\
+ --source="Application"\
+ --sequence="$GLITE_WMS_SEQUENCE_CODE"\
+ --event="UserTag"\
+ --node=$host\
+ --name="$1"\
+ --value="$2"\
+ || echo $GLITE_WMS_SEQUENCE_CODE`
+}
+
+init_log_event()
+{
+ lb_logevent=${GLITE_WMS_LOCATION}/bin/glite-lb-logevent
+ if [ ! -x "$lb_logevent" ]; then
+ lb_logevent="${EDG_WL_LOCATION}/bin/edg-wl-logev"
+ fi
+ host=`hostname -f`
+}
+
+
set -ex
hostname -f
./convert atlas.pgm atlas.gif
globus-url-copy file://$PWD/atlas.gif $1-$2.gif
+
+
+# Log LB user_tags
+init_log_event
+log_event "IPAW_STAGE" "5"
+log_event "IPAW_PROGRAM" "convert"
+log_event "IPAW_INPUT" "$1-$2.pgm"
+log_event "IPAW_OUTPUT" "$1-$2.gif"
+
#!/bin/sh
+log_event() #1 - attr.name #2 attr.value
+{
+ GLITE_WMS_SEQUENCE_CODE=`$lb_logevent\
+ --jobid="$GLITE_WMS_JOBID"\
+ --source="Application"\
+ --sequence="$GLITE_WMS_SEQUENCE_CODE"\
+ --event="UserTag"\
+ --node=$host\
+ --name="$1"\
+ --value="$2"\
+ || echo $GLITE_WMS_SEQUENCE_CODE`
+}
+
+init_log_event()
+{
+ lb_logevent=${GLITE_WMS_LOCATION}/bin/glite-lb-logevent
+ if [ ! -x "$lb_logevent" ]; then
+ lb_logevent="${EDG_WL_LOCATION}/bin/edg-wl-logev"
+ fi
+ host=`hostname -f`
+}
+
+
set -ex
hostname -f
globus-url-copy file://$PWD/resliced.img $1-resliced.img
globus-url-copy file://$PWD/resliced.hdr $1-resliced.hdr
+
+
+# Log LB user_tags
+init_log_event
+log_event "IPAW_STAGE" "2"
+log_event "IPAW_PROGRAM" "reslice"
+log_event "IPAW_INPUT" "$1.warp"
+log_event "IPAW_INPUT" "$1.img"
+log_event "IPAW_INPUT" "$1.hdr"
+log_event "IPAW_OUTPUT" "$1-resliced.img"
+log_event "IPAW_OUTPUT" "$1-resliced.img"
+
#!/bin/sh
+log_event() #1 - attr.name #2 attr.value
+{
+ GLITE_WMS_SEQUENCE_CODE=`$lb_logevent\
+ --jobid="$GLITE_WMS_JOBID"\
+ --source="Application"\
+ --sequence="$GLITE_WMS_SEQUENCE_CODE"\
+ --event="UserTag"\
+ --node=$host\
+ --name="$1"\
+ --value="$2"\
+ || echo $GLITE_WMS_SEQUENCE_CODE`
+}
+
+init_log_event()
+{
+ lb_logevent=${GLITE_WMS_LOCATION}/bin/glite-lb-logevent
+ if [ ! -x "$lb_logevent" ]; then
+ lb_logevent="${EDG_WL_LOCATION}/bin/edg-wl-logev"
+ fi
+ host=`hostname -f`
+}
+
+
set -ex
hostname -f
./slicer atlas.hdr -$2 .5 atlas-$2.pgm
globus-url-copy file://$PWD/atlas-$2.pgm $1-$2.pgm
+
+
+# Log LB user_tags
+init_log_event
+log_event "IPAW_STAGE" "4"
+log_event "IPAW_PROGRAM" "slicer"
+log_event "IPAW_INPUT" "$1.hdr"
+log_event "IPAW_INPUT" "$1.img"
+log_event "IPAW_OUTPUT" "$1-$2.pgm"
+
#!/bin/sh
+log_event() #1 - attr.name #2 attr.value
+{
+ GLITE_WMS_SEQUENCE_CODE=`$lb_logevent\
+ --jobid="$GLITE_WMS_JOBID"\
+ --source="Application"\
+ --sequence="$GLITE_WMS_SEQUENCE_CODE"\
+ --event="UserTag"\
+ --node=$host\
+ --name="$1"\
+ --value="$2"\
+ || echo $GLITE_WMS_SEQUENCE_CODE`
+}
+
+init_log_event()
+{
+ lb_logevent=${GLITE_WMS_LOCATION}/bin/glite-lb-logevent
+ if [ ! -x "$lb_logevent" ]; then
+ lb_logevent="${EDG_WL_LOCATION}/bin/edg-wl-logev"
+ fi
+ host=`hostname -f`
+}
+
+
set -ex
hostname -f
globus-url-copy file://$PWD/atlas.img $5.img
globus-url-copy file://$PWD/atlas.hdr $5.hdr
+
+
+# Log LB user_tags
+init_log_event
+log_event "IPAW_STAGE" "3"
+log_event "IPAW_PROGRAM" "softmean"
+log_event "IPAW_INPUT" "$1-resliced.img"
+log_event "IPAW_INPUT" "$1-resliced.hdr"
+log_event "IPAW_INPUT" "$2-resliced.img"
+log_event "IPAW_INPUT" "$2-resliced.hdr"
+log_event "IPAW_INPUT" "$3-resliced.img"
+log_event "IPAW_INPUT" "$3-resliced.hdr"
+log_event "IPAW_INPUT" "$4-resliced.img"
+log_event "IPAW_INPUT" "$4-resliced.hdr"
+log_event "IPAW_OUTPUT" "$5.img"
+log_event "IPAW_OUTPUT" "$5.hdr"
+